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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792523.1_cds_XP_016512602.1_2444
CDS Infomation

[gene=LOC107829656] [db_xref=GeneID:107829656] [protein=2-oxoglutarate-dependent dioxygenase AOP3-like] [protein_id=XP_016512602.1] [location=join(22779..23155,23735..24059,24893..25132)] [gbkey=CDS]
Sequence

ATGGCTTCCCAAGTAGAACCAAAGCTTCCCATTATTGAGTTCACAGATGAAAACTTGAGC
AGTGGCACAAGCTGTTGGATATCAACTTCCCAAGAAATCCGCCGTGCATTGGAAGAGTAC
GGCTGCTTTGCGGCAGTGTACAAGAAAGTGTCACCGGAGCTCCGGGAAGCCATGTTCAAT
CACTGTAAGGAGTTGTTCCAACTTCCTTTAGAAGTTAAACTCCAAAGTACTTCTGATGTT
TTGGGGTTTGGATATGGTGGGAATTTCCCTAACATGCCTCTTGCTGAATACTTTGGCATC
GAAAATGGTGGAACTCTTAATTCAACCAATAATTTTGCCAAACAGATGTGGCCCAATGCC
AACGTTGATAAATTTTGTGAAGAAACGCTTTCATATTCTAAATTGATTGCTGAACTGGAC
GATGCGGTGATTCGAATGATGTTGGAAAGCTACAGCTTAGAGAAATATTACGAGCCTCTA
AAAAATTCGTGTATGTATTTAATGAGATTCATTAAATATCGAAGCCCGAAAATGAATGAA
ATAAATATAGGTCATCTACCTCATAGAGATAAGTCATTTATGGGGATCATTGACACTAAT
CAAGTAGGAGGTTTGGAGATGCAAACAAGAGATGGAAATTGGATTACTTTCAATCCCTCC
TCTTATAAGACTGTCGTATTCATAGCTGGTGAGCCTTTCACGGCATGGAGTAATGGAAGG
GTGTATGCTCCGATACATCGAGTGATTATGAAAGGAAGTGAAGATAAATATTCGCTTGCA
TTATTCTCATTTATGCGAGGGACAGTGAAAATACCAGAGGAGCTAATTGATGAAGAGAAC
CCACAACATTTCAAGTCATTTGATCACTTTGAATATCTGAAATACTGTGCAACAGATGGC
TGGAAAGAGAAAAATCCCATCAAATCCTATTGTGGTGTTTGA

Peptide Sequence

PEP ID

XP_016512602.1
PEP Infomation

PREDICTED: 2-oxoglutarate-dependent dioxygenase AOP3-like [Nicotiana tabacum]
Sequence

MASQVEPKLPIIEFTDENLSSGTSCWISTSQEIRRALEEYGCFAAVYKKVSPELREAMFN
HCKELFQLPLEVKLQSTSDVLGFGYGGNFPNMPLAEYFGIENGGTLNSTNNFAKQMWPNA
NVDKFCEETLSYSKLIAELDDAVIRMMLESYSLEKYYEPLKNSCMYLMRFIKYRSPKMNE
INIGHLPHRDKSFMGIIDTNQVGGLEMQTRDGNWITFNPSSYKTVVFIAGEPFTAWSNGR
VYAPIHRVIMKGSEDKYSLALFSFMRGTVKIPEELIDEENPQHFKSFDHFEYLKYCATDG
WKEKNPIKSYCGV

Transcript Sequence

Gene sequence data has not been registered.